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Chloroplast Research in Arabidopsis

Methods and Protocols, Volume I, Methods in Molecular Biology 774

Erschienen am 09.08.2011, 1. Auflage 2011
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Bibliografische Daten
ISBN/EAN: 9781617792335
Sprache: Englisch
Umfang: x, 374 S.
Einband: gebundenes Buch

Beschreibung

InhaltsangabePart I: Genetics, Cytology, and In Vivo Analysis 1. Screening or Selection for Chloroplast Biogenesis Mutants of Arabidopsis, Following Chemical or Insertional Mutagenesis            Enrique López-Juez and Alison Hills 2. Analysis of Plastid Number, Size, and Distribution in Arabidopsis Plants by Light and Fluorescence Microscopy            Kevin Pyke 3. Immunofluorescence Microscopy for Localization of Arabidopsis Chloroplast Proteins            Stanislav Vitha and Katherine W. Osteryoung 4. Transient Expression and Analysis of Chloroplast Proteins in Arabidopsis Protoplasts            Dong Wook Lee and Inhwan Hwang 5. Visualisation of Stromules on Arabidopsis Plastids            John C. Gray, James A. Sullivan, and Christine A. Newell 6. Analysis of Chloroplast Movement and Relocation in Arabidopsis            Masamitsu Wada and Sam-Geun Kong 7. Studying Starch Content and Sedimentation of Amyloplast Statoliths In Arabidopsis Roots            John Stanga, Allison Strohm, and Patrick H. Masson 8. Studying Arabidopsis Chloroplast Structural Organization Using Transmission Electron Microscopy            Stefan Hyman and R. Paul Jarvis 9. Transplastomics in Arabidopsis: Progress Towards Developing an Efficient Method            Kerry Ann Lutz, Arun Azhagiri, and Pal Maliga Part II: Gene Expression and Protein Accumulation 10. Isolation, Quantification, and Analysis of Chloroplast DNA            Beth A. Rowan and Arnold J. Bendich 11. Measurement of Transcription Rates in Arabidopsis Chloroplasts            Yan O. Zubo, Thomas Börner, and Karsten Liere 12. Studying the Structure and Processing of Chloroplast Transcripts            Alice Barkan 13. In Vitro RNA Binding Assay for Studying Trans-Factors for RNA Editing in Chloroplasts            Toshiharu Shikanai and Kenji Okuda 14. Studying Translation in Arabidopsis Chloroplasts            Paolo Pesaresi 15. Studying Proteases and Protein Turnover in Arabidopsis Chloroplasts            Lars L.E. Sjögren and Adrian K. Clarke Part III: Protein Transport, Localization, and Topology 16. In Silico Methods for the Identification of Organellar and Suborganellar Targeting Peptides in Arabidopsis Chloroplast Proteins and for Predicting the Topology of Membrane Proteins            Sandra Tanz and Ian Small 17. Rapid Isolation of Arabidopsis Chloroplasts and Their Use for In Vitro Protein Import Assays            Henrik Aronsson and R. Paul Jarvis 18. Energetic Manipulation of Chloroplast Protein Import and the Use of Chemical Cross-Linkers to Map Protein-Protein Interactions            Hitoshi Inoue, Fei Wang, Takehito Inaba, and Danny J. Schnell 19. Isolation of Arabidopsis Thylakoid Membranes and Their Use for In Vitro Protein Insertion or Transport Assays            Thomas Bals and Danja Schünemann 20. Determining the Location of an Arabidopsis Chloroplast Protein Using In Vitro Import Followed by Fractionation and Alkaline Extraction            Chiung-Chih Chu and Hsou-min Li 21. Studying Arabidopsis Envelope Protein Localization and Topology Using Thermolysin and Trypsin Proteases            John Froehlich

Inhalt

Part I: Genetics, Cytology, and In Vivo Analysis   1. Screening or Selection for Chloroplast Biogenesis Mutants of Arabidopsis, Following Chemical or Insertional Mutagenesis             Enrique Lopez-Juez and Alison Hills   2. Analysis of Plastid Number, Size, and Distribution in Arabidopsis Plants by Light and Fluorescence Microscopy             Kevin Pyke   3. Immunofluorescence Microscopy for Localization of Arabidopsis Chloroplast Proteins             Stanislav Vitha and Katherine W. Osteryoung   4. Transient Expression and Analysis of Chloroplast Proteins in Arabidopsis Protoplasts             Dong Wook Lee and Inhwan Hwang   5. Visualisation of Stromules on Arabidopsis Plastids             John C. Gray, James A. Sullivan, and Christine A. Newell   6. Analysis of Chloroplast Movement and Relocation in Arabidopsis             Masamitsu Wada and Sam-Geun Kong   7. Studying Starch Content and Sedimentation of Amyloplast Statoliths In Arabidopsis Roots             John Stanga, Allison Strohm, and Patrick H. Masson   8. Studying Arabidopsis Chloroplast Structural Organization Using Transmission Electron Microscopy             Stefan Hyman and R. Paul Jarvis   9. Transplastomics in Arabidopsis: Progress Towards Developing an Efficient Method             Kerry Ann Lutz, Arun Azhagiri, and Pal Maliga   Part II: Gene Expression and Protein Accumulation   10. Isolation, Quantification, and Analysis of Chloroplast DNA             Beth A. Rowan and Arnold J. Bendich   11. Measurement of Transcription Rates in Arabidopsis Chloroplasts             Yan O. Zubo, Thomas Börner, and Karsten Liere   12. Studying the Structure and Processing of Chloroplast Transcripts             Alice Barkan   13. In Vitro RNA Binding Assay for Studying Trans-Factors for RNA Editing in Chloroplasts             Toshiharu Shikanai and Kenji Okuda   14. Studying Translation in Arabidopsis Chloroplasts             Paolo Pesaresi   15. Studying Proteases and Protein Turnover in Arabidopsis Chloroplasts             Lars L.E. Sjögren and Adrian K. Clarke   Part III: Protein Transport, Localization, and Topology   16. In Silico Methods for the Identification of Organellar and Suborganellar Targeting Peptides in Arabidopsis Chloroplast Proteins and for Predicting the Topology of Membrane Proteins             Sandra Tanz and Ian Small   17. Rapid Isolation of Arabidopsis Chloroplasts and Their Use for In Vitro Protein Import Assays             Henrik Aronsson and R. Paul Jarvis   18. Energetic Manipulation of Chloroplast Protein Import and the Use of Chemical Cross-Linkers to Map Protein-Protein Interactions             Hitoshi Inoue, Fei Wang, Takehito Inaba, and Danny J. Schnell   19. Isolation of Arabidopsis Thylakoid Membranes and Their Use for In Vitro Protein Insertion or Transport Assays             Thomas Bals and Danja Schünemann   20. Determining the Location of an Arabidopsis Chloroplast Protein Using In Vitro Import Followed by Fractionation and Alkaline Extraction             Chiung-Chih Chu and Hsou-min Li   21. Studying Arabidopsis Envelope Protein Localization and Topology Using Thermolysin and Trypsin Proteases             John Froehlich

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